Bacterial Endophytic Communities in the Grapevine Depend on Pest Management
Identifieur interne : 000909 ( Main/Exploration ); précédent : 000908; suivant : 000910Bacterial Endophytic Communities in the Grapevine Depend on Pest Management
Auteurs : Andrea Campisano [Italie] ; Livio Antonielli [Italie, Autriche] ; Michael Pancher [Italie] ; Sohail Yousaf [Italie, Pakistan] ; Massimo Pindo [Italie] ; Ilaria Pertot [Italie]Source :
- PLoS ONE [ 1932-6203 ] ; 2014.
Abstract
Microbial plant endophytes are receiving ever-increasing attention as a result of compelling evidence regarding functional interaction with the host plant. Microbial communities in plants were recently reported to be influenced by numerous environmental and anthropogenic factors, including soil and pest management. In this study we used automated ribosomal intergenic spacer analysis (ARISA) fingerprinting and pyrosequencing of 16S rDNA to assess the effect of organic production and integrated pest management (IPM) on bacterial endophytic communities in two widespread grapevines cultivars (Merlot and Chardonnay). High levels of the dominant
Url:
DOI: 10.1371/journal.pone.0112763
PubMed: 25387008
PubMed Central: 4227848
Affiliations:
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Michele all'Adige (TN), Italy</addr-line></nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Research and Innovation Centre, Fondazione Edmund Mach (FEM), S. Michele all'Adige (TN)</wicri:regionArea><wicri:noRegion>S. Michele all'Adige (TN)</wicri:noRegion></affiliation></author><author><name sortKey="Antonielli, Livio" sort="Antonielli, Livio" uniqKey="Antonielli L" first="Livio" last="Antonielli">Livio Antonielli</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Research and Innovation Centre, Fondazione Edmund Mach (FEM), S. Michele all'Adige (TN), Italy</addr-line></nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Research and Innovation Centre, Fondazione Edmund Mach (FEM), S. Michele all'Adige (TN)</wicri:regionArea><wicri:noRegion>S. 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Michele all'Adige (TN)</wicri:noRegion></affiliation></author><author><name sortKey="Pertot, Ilaria" sort="Pertot, Ilaria" uniqKey="Pertot I" first="Ilaria" last="Pertot">Ilaria Pertot</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Research and Innovation Centre, Fondazione Edmund Mach (FEM), S. Michele all'Adige (TN), Italy</addr-line></nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Research and Innovation Centre, Fondazione Edmund Mach (FEM), S. Michele all'Adige (TN)</wicri:regionArea><wicri:noRegion>S. Michele all'Adige (TN)</wicri:noRegion></affiliation></author></analytic><series><title level="j">PLoS ONE</title><idno type="eISSN">1932-6203</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Microbial plant endophytes are receiving ever-increasing attention as a result of compelling evidence regarding functional interaction with the host plant. Microbial communities in plants were recently reported to be influenced by numerous environmental and anthropogenic factors, including soil and pest management. In this study we used automated ribosomal intergenic spacer analysis (ARISA) fingerprinting and pyrosequencing of 16S rDNA to assess the effect of organic production and integrated pest management (IPM) on bacterial endophytic communities in two widespread grapevines cultivars (Merlot and Chardonnay). High levels of the dominant <italic>Ralstonia</italic>, <italic>Burkholderia</italic> and <italic>Pseudomonas</italic> genera were detected in all the samples We found differences in the composition of endophytic communities in grapevines cultivated using organic production and IPM. Operational taxonomic units (OTUs) assigned to the <italic>Mesorhizobium</italic>, <italic>Caulobacter</italic> and <italic>Staphylococcus</italic> genera were relatively more abundant in plants from organic vineyards, while <italic>Ralstonia</italic>, <italic>Burkholderia</italic> and <italic>Stenotrophomonas</italic> were more abundant in grapevines from IPM vineyards. Minor differences in bacterial endophytic communities were also found in the grapevines of the two cultivars.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Zabalgogeazcoa, I" uniqKey="Zabalgogeazcoa I">I Zabalgogeazcoa</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hallmann, J" uniqKey="Hallmann J">J Hallmann</name></author><author><name sortKey="Quadthallmann, A" uniqKey="Quadthallmann A">A QuadtHallmann</name></author><author><name sortKey="Mahaffee, Wf" uniqKey="Mahaffee W">WF Mahaffee</name></author><author><name sortKey="Kloepper, Jw" uniqKey="Kloepper J">JW Kloepper</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Moy, M" uniqKey="Moy M">M Moy</name></author><author><name sortKey="Li, Hjm" uniqKey="Li H">HJM Li</name></author><author><name sortKey="Sullivan, R" uniqKey="Sullivan R">R Sullivan</name></author><author><name sortKey="White, Jf" 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Gobet</name></author><author><name sortKey="Boetius, A" uniqKey="Boetius A">A Boetius</name></author><author><name sortKey="Ramette, A" uniqKey="Ramette A">A Ramette</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schmid, F" uniqKey="Schmid F">F Schmid</name></author><author><name sortKey="Moser, G" uniqKey="Moser G">G Moser</name></author><author><name sortKey="Muller, H" uniqKey="Muller H">H Muller</name></author><author><name sortKey="Berg, G" uniqKey="Berg G">G Berg</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Autriche</li><li>Italie</li><li>Pakistan</li></country></list><tree><country name="Italie"><noRegion><name sortKey="Campisano, Andrea" sort="Campisano, Andrea" uniqKey="Campisano A" first="Andrea" last="Campisano">Andrea Campisano</name></noRegion><name sortKey="Antonielli, Livio" sort="Antonielli, Livio" uniqKey="Antonielli L" first="Livio" last="Antonielli">Livio Antonielli</name><name sortKey="Pancher, Michael" sort="Pancher, Michael" uniqKey="Pancher M" first="Michael" last="Pancher">Michael Pancher</name><name sortKey="Pertot, Ilaria" sort="Pertot, Ilaria" uniqKey="Pertot I" first="Ilaria" last="Pertot">Ilaria Pertot</name><name sortKey="Pindo, Massimo" sort="Pindo, Massimo" uniqKey="Pindo M" first="Massimo" last="Pindo">Massimo Pindo</name><name sortKey="Yousaf, Sohail" sort="Yousaf, Sohail" uniqKey="Yousaf S" first="Sohail" last="Yousaf">Sohail Yousaf</name></country><country name="Autriche"><noRegion><name sortKey="Antonielli, Livio" sort="Antonielli, Livio" uniqKey="Antonielli L" first="Livio" last="Antonielli">Livio Antonielli</name></noRegion></country><country name="Pakistan"><noRegion><name sortKey="Yousaf, Sohail" sort="Yousaf, Sohail" uniqKey="Yousaf S" first="Sohail" last="Yousaf">Sohail Yousaf</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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